Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGCATGGCCCAGCTGCT
..(((((((.((((((..(((&)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020530
GeneSymbolOSM
Binding site503,522
Score0.981
Seed1
Au0.397
Energy-21.6
Binding len19
Me-6.2
Phylopstem-0.35475905714285716
Phylopflank0.100636785
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure