Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCGCAGCCTACACGCGGGAGCAGCTGTAC
.((((((((((((((((((((&))))).))))))...........))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020533
GeneSymbolMCOLN1
Binding site472,505
Score0.923
Seed1
Au0.412
Energy-26.0
Binding len33
Me-3.793
Phylopstem2.02591919375
Phylopflank2.8700283449999993
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure