Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGTTAGGGCTGCTAGGGCTGCAAA
((((((((((((((.(((.((&)).))).))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365748
GeneSymbolPABIR3
Binding site189,214
Score0.846
Seed1
Au0.456
Energy-23.0
Binding len25
Me-4.673
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure