Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAATACTGCTAAGTTGCT
..(((((((((((((((((((&))))))))..)))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020549
GeneSymbolCHAT
Binding site5059,5083
Score0.923
Seed1
Au0.721
Energy-23.4
Binding len24
Me-4.957
Phylopstem1.3335340000000002
Phylopflank1.45285524625
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end8
Position3UTR
2D Structure