Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGCACGTCATCGTAGCCTGCT
..((((((((((((((.((((&))))..)))....)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020549
GeneSymbolCHAT
Binding site1052,1078
Score0.808
Seed1
Au0.471
Energy-20.0
Binding len26
Me-4.957
Phylopstem5.7663626315789465
Phylopflank5.110724425
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure