Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACGTGAAGAGGAGCCAGGG
.((((((.....((((((....&))))))........)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020630
GeneSymbolRET
Binding site2901,2922
Score0.808
Seed1
Au0.544
Energy-16.9
Binding len21
Me-14.577
Phylopstem4.529701
Phylopflank4.98962421375
Longest consecutive pairings6
Position of longest consecutive pairings15
Pairings in 3prime end4
PositionCDS
2D Structure