Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCATAGTTTTCTGACAATTTGGACAACTGTAGTTGCAAA
((((((((((((((((.....&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020633
GeneSymbolVN1R1
Binding site1517,1556
Score0.923
Seed1
Au0.544
Energy-24.9
Binding len18
Me-3.938
Phylopstem5.073810181250001
Phylopflank3.62224540375
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure