Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCAGCCCAGAACGGGGACGAGTCTAGCACACGGCTGCT
..(((((((.(((((((((((&)))))))))))........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020639
GeneSymbolRIPK4
Binding site1536,1579
Score0.846
Seed1
Au0.382
Energy-22.4
Binding len43
Me-6.2
Phylopstem1.1031266
Phylopflank1.394897075
Longest consecutive pairings11
Position of longest consecutive pairings32
Pairings in 3prime end8
PositionCDS
2D Structure