Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAATAAAAGCTGCAGT
((((((((...(((((.....&)))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020640
GeneSymbolDCUN1D1
Binding site3527,3544
Score0.923
Seed1
Au0.618
Energy-17.3
Binding len17
Me-9.061
Phylopstem1.24927775
Phylopflank1.2615176137499997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure