Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTACAACTATACTGGGCTGCT
..((((((..(((((((((..&)))))))))......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020640
GeneSymbolDCUN1D1
Binding site3713,3735
Score0.808
Seed1
Au0.721
Energy-17.7
Binding len22
Me-7.256
Phylopstem0.2663870222222222
Phylopflank0.489673975
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure