Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCCACCATCATGCCTGCTGCCAGCTACTGTGCCAGGG
.(((((((((....((((....&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020643
GeneSymbolC11orf16
Binding site864,904
Score0.923
Seed1
Au0.338
Energy-19.0
Binding len15
Me-12.111
Phylopstem0.41079286666666676
Phylopflank0.6911622849999999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure