Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTGGCACTTTATCCTTTCAGTGTTTCTGGCTGTGTTGGGTT
(((((((((((((((((((...&)))))))))...........................)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020645
GeneSymbolNRIP3
Binding site3669,3716
Score0.846
Seed1
Au0.603
Energy-18.1
Binding len47
Me-3.938
Phylopstem1.8035893130434786
Phylopflank1.5371044806756755
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure