Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCCACGGCTGCC
..(((((((.(((.((.....&)).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020646
GeneSymbolASCL3
Binding site198,213
Score0.846
Seed1
Au0.426
Energy-19.0
Binding len15
Me-7.056
Phylopstem4.55655
Phylopflank4.2752028074999995
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure