Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAGTGGTGCCGT
...((((((.((.((((((...&)))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020647
GeneSymbolJPH1
Binding site2293,2309
Score0.846
Seed0
Au0.412
Energy-15.9
Binding len16
Me-9.046
Phylopstem3.362352
Phylopflank3.4025463125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure