Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACTGCGGCGGCTGGGAG
((.(((((((.((.((.((((&)))))).)).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020647
GeneSymbolJPH1
Binding site289,310
Score0.846
Seed0
Au0.309
Energy-23.0
Binding len21
Me-9.177
Phylopstem4.613700285714286
Phylopflank4.299164537499999
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure