Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCCGACAGGCCGCGCTGGGACAGGTGCCGGTA
.((((((.(((.((((((((((&)))))))...............))).))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001365764
GeneSymbolUSP42
Binding site3238,3275
Score0.846
Seed1
Au0.353
Energy-24.9
Binding len37
Me-9.454
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings30
Pairings in 3prime end8
PositionCDS
2D Structure