Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACTCCGCAGA
......((((((..((((((.&)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020649
GeneSymbolCBX8
Binding site2050,2064
Score0.846
Seed0
Au0.544
Energy-19.5
Binding len14
Me-17.713
Phylopstem0.4161023833333333
Phylopflank0.45039244874999984
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure