Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTACAGCACGGATTTATGCTGCAGG
((((((((.(((((((((((.&))))))))).)).).....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020651
GeneSymbolPELI1
Binding site852,879
Score0.923
Seed1
Au0.588
Energy-21.6
Binding len27
Me-4.994
Phylopstem0.5578560333333333
Phylopflank-0.03419887875000007
Longest consecutive pairings9
Position of longest consecutive pairings18
Pairings in 3prime end7
PositionCDS
2D Structure