Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTATGACTGCAGTGAATGTGGA
(((((((((((((((((((((&))))))))))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020657
GeneSymbolZNF304
Binding site1392,1417
Score0.923
Seed1
Au0.529
Energy-21.7
Binding len25
Me-3.938
Phylopstem-0.1812816291666666
Phylopflank-0.3191575499999999
Longest consecutive pairings16
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure