Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCGGCCCAGCAGCTGCAGG
(((((((((((((((((....&)))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020659
GeneSymbolTTYH1
Binding site631,651
Score0.923
Seed1
Au0.25
Energy-26.2
Binding len20
Me-3.938
Phylopstem0.6080514210526315
Phylopflank1.2379242624999995
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure