Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGCGGCGCAGCTTTGCGGG
((((((((((.(((((..(((&)))..)))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020662
GeneSymbolMRS2
Binding site256,279
Score0.846
Seed1
Au0.324
Energy-21.4
Binding len23
Me-6.762
Phylopstem0.10155025000000001
Phylopflank0.24058613875
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure