Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCAAGAATGAACTGCAAAGAGGGAACTGACAGCAGCTGCGGCTGCAGG
((((((((((((((((.....&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020663
GeneSymbolRHOJ
Binding site418,469
Score1.0
Seed1
Au0.456
Energy-28.5
Binding len18
Me-3.938
Phylopstem1.3281631437500006
Phylopflank0.8335210312499999
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure