Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCACTGCAGTAAATCTTCAGTCCGCAGCA
.....((((((((((.(((((&.)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020666
GeneSymbolCLK4
Binding site401,430
Score1.0
Seed0
Au0.515
Energy-19.8
Binding len18
Me-13.899
Phylopstem-0.13270003636363634
Phylopflank-0.004059149999999984
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure