Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGTTGTGTGTGGGATTGTGTGTCTCATGATGTTGGCAGCTGCCATCTATGGCTGCAC
.(((((((((((((((.....&.)))))))).......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020678
GeneSymbolLRTM1
Binding site1025,1083
Score0.923
Seed1
Au0.456
Energy-21.4
Binding len24
Me-3.793
Phylopstem2.6358226363636366
Phylopflank2.4309966472499998
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end3
PositionCDS
2D Structure