Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCCCGGGCCCTGGGCCCTGCACCGCGGCCGCAAG
((((.(((((((.((((.(((&.))).))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020680
GeneSymbolSCYL1
Binding site141,179
Score0.846
Seed0
Au0.25
Energy-26.6
Binding len22
Me-9.346
Phylopstem1.2602738571428571
Phylopflank2.0244442012499992
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure