Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTCGGCCAAGCAGCTGA
...((((((((((((..((((&))))..)))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020692
GeneSymbolGALNT16
Binding site350,371
Score0.923
Seed0
Au0.412
Energy-24.3
Binding len21
Me-6.748
Phylopstem3.467772785714286
Phylopflank4.492788125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure