Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATTCCCAGCATCTGTGTGTCAGGC
.(((((((((((((((......&.)))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020703
GeneSymbolAMIGO1
Binding site2714,2739
Score1.0
Seed1
Au0.471
Energy-20.6
Binding len18
Me-3.793
Phylopstem1.018139025
Phylopflank0.6245552575
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure