Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GAGGTCTTTGCAGTTGTGGTTGTGA
((((((((((((((((((((.&.))))))))))))))))))))
Details
MiRNAhsa-miR-5047
RefseqIDNM_020703
GeneSymbolAMIGO1
Binding site3270,3295
Score0.846
Seed1
Au0.515
Energy-19.5
Binding len21
Me-3.938
Phylopstem4.323585799999999
Phylopflank1.3539827600000003
Longest consecutive pairings20
Position of longest consecutive pairings0
Pairings in 3prime end7
Position3UTR
2D Structure