Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGTGCGCCTTCGATGACATGGCCCAGCTGCAGA
(((((((((.(((((((((((&.))))).......))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020703
GeneSymbolAMIGO1
Binding site843,879
Score1.0
Seed1
Au0.441
Energy-24.0
Binding len29
Me-5.18
Phylopstem0.3842901
Phylopflank0.4418693050000001
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure