Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTGGGCAGTGTGCCAGGG
.((((((((((..(((......&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020707
GeneSymbolHHATL
Binding site180,200
Score1.0
Seed1
Au0.309
Energy-20.3
Binding len15
Me-8.429
Phylopstem2.3052259
Phylopflank3.6638626824999996
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure