Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGGTAACCGCACGCTGTC
..(((((((((((((..(((.&)))...)))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020708
GeneSymbolSLC12A5
Binding site993,1014
Score0.846
Seed1
Au0.412
Energy-22.7
Binding len21
Me-5.19
Phylopstem4.933003664285715
Phylopflank4.192413001249999
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure