Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGCAAGCTGCGGCTGCT
..((((((((((((((..(((&)))..)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020709
GeneSymbolPNMA8B
Binding site15,36
Score0.846
Seed1
Au0.277
Energy-25.4
Binding len21
Me-4.957
Phylopstem-0.04600156666666667
Phylopflank-0.2181342324999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure