Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCAACCCCGGCTGA
...((((((.((((((.(((.&))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020709
GeneSymbolPNMA8B
Binding site3532,3549
Score0.846
Seed0
Au0.471
Energy-22.0
Binding len17
Me-7.757
Phylopstem-0.6733071833333333
Phylopflank0.134624797375
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure