Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGCACAAACTGCAGCGCAC
.(((.(((((((((((.((((&))))..)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020715
GeneSymbolPLEKHH1
Binding site1810,1834
Score0.923
Seed0
Au0.382
Energy-22.1
Binding len24
Me-7.912
Phylopstem4.502498792857144
Phylopflank3.48148947375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure