Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCCTTATCTACATCTCATTTGCCAGGTT
((((((((....((((((((..&.))))))))......)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020717
GeneSymbolSHROOM4
Binding site2520,2550
Score0.923
Seed1
Au0.618
Energy-21.8
Binding len24
Me-12.408
Phylopstem0.3362361625
Phylopflank0.12245499137499996
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure