Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAAGGTCAACTGTAGCAGCAGG
((((.(((((((((((((((.&))))).....)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020717
GeneSymbolSHROOM4
Binding site6284,6310
Score0.923
Seed0
Au0.529
Energy-22.5
Binding len26
Me-8.057
Phylopstem1.1131154749999999
Phylopflank1.6102944423749999
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure