Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTATAAACTGTATGTCATGGA
.(((((((((((.(((((((..&)))))))...))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020718
GeneSymbolUSP31
Binding site6646,6669
Score0.846
Seed1
Au0.676
Energy-19.0
Binding len23
Me-5.082
Phylopstem4.1105
Phylopflank2.4798500000000003
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure