Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTGGAAAGCCTGTAGCTGCC
..((((((((((((....(((&)))......)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020726
GeneSymbolNLN
Binding site8038,8061
Score0.846
Seed1
Au0.5
Energy-19.3
Binding len23
Me-5.925
Phylopstem0.29982927692307687
Phylopflank0.03163168250000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure