Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGACAACTGGAAGCTGCT
..((((((.(((((((..(((&)))..)))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020729
GeneSymbolODF2L
Binding site2027,2048
Score1.0
Seed1
Au0.544
Energy-23.5
Binding len21
Me-6.013
Phylopstem2.8191490142857143
Phylopflank1.8070959762500003
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure