Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGAGATAGTTGCAGCCCGCTCTGCTGCAAC
(((((((.((((((((((...&.)))))))).))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020730
GeneSymbolDLG3
Binding site46,80
Score0.846
Seed1
Au0.529
Energy-22.8
Binding len23
Me-6.251
Phylopstem-0.06402690909090906
Phylopflank0.09201306094594594
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end5
Position5UTR
2D Structure