Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCCGGCTGCAGACGCCTGCGAG
(((((((((((((((..((((&))))..)))))))))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020739
GeneSymbolCCPG1
Binding site15,41
Score0.846
Seed1
Au0.382
Energy-24.4
Binding len26
Me-4.171
Phylopstem0.7658423368421051
Phylopflank1.1327979027272725
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position5UTR
2D Structure