Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAGCCACAGCC
.....((((.(((((.(((((&)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020739
GeneSymbolCCPG1
Binding site5579,5595
Score1.0
Seed0
Au0.574
Energy-20.0
Binding len16
Me-15.141
Phylopstem2.1013862999999997
Phylopflank2.41716597
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure