Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAATGACAACCCTGCTGCGT
.((((((.(.((((((.(((.&)))....))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020741
GeneSymbolCFAP92
Binding site1368,1390
Score0.846
Seed1
Au0.441
Energy-19.0
Binding len22
Me-7.349
Phylopstem-0.65093785
Phylopflank-0.3166546237499999
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure