Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTATGCTGCAGCA
.....(((((((.((((((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365789
GeneSymbolACOT6
Binding site359,375
Score0.846
Seed0
Au0.515
Energy-18.3
Binding len16
Me-14.955
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end8
Position5UTR
2D Structure