Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCACTTCCGGGGCTGTG
..((((((.(((..((.(((.&))).))..))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020746
GeneSymbolMAVS
Binding site2533,2552
Score0.846
Seed1
Au0.456
Energy-22.4
Binding len19
Me-8.159
Phylopstem1.5344015000000002
Phylopflank0.2876114475
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure