Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCATCCGCAGCCAGCT
..((.(((((((.(((.(((.&)))))).)))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020746
GeneSymbolMAVS
Binding site11252,11271
Score0.846
Seed0
Au0.382
Energy-21.9
Binding len19
Me-10.365
Phylopstem-0.029916428571428528
Phylopflank-0.12794260749999997
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure