Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTACAAATAACAGCTGTAGT
(((((((((...(((((.(((&))).)))))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020749
GeneSymbolMTUS1
Binding site3141,3164
Score0.846
Seed1
Au0.618
Energy-18.0
Binding len23
Me-11.352
Phylopstem1.4543441222222218
Phylopflank2.531067674999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure