Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAATTGCAAGAGCAGTTTGACAACTTAAATGCTGCGC
.((((((((((((((((....&))))))))))......................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020749
GeneSymbolMTUS1
Binding site882,921
Score0.846
Seed1
Au0.603
Energy-17.8
Binding len39
Me-3.793
Phylopstem-0.32884210526315794
Phylopflank-0.4448
Longest consecutive pairings10
Position of longest consecutive pairings29
Pairings in 3prime end4
PositionCDS
2D Structure