Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCGACCGGGGCTGCC
..((((((.((((((((....&)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020751
GeneSymbolCOG6
Binding site100,116
Score0.923
Seed1
Au0.309
Energy-25.6
Binding len16
Me-6.013
Phylopstem0.06361236249999996
Phylopflank0.7566761175
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure