Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCGGCGACGACCTGCAACCCGCTGTCGCGCAAGCTGCAT
.(((((((((((((((.((((&.)))))))))).........))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020751
GeneSymbolCOG6
Binding site143,185
Score0.923
Seed1
Au0.368
Energy-24.0
Binding len31
Me-3.793
Phylopstem2.581744076
Phylopflank2.58786923125
Longest consecutive pairings10
Position of longest consecutive pairings20
Pairings in 3prime end7
PositionCDS
2D Structure